Recombinant:Article Title: Illuminating Host-Mycobacterial Interactions with Genome-wide CRISPR Knockout and CRISPRi Screens.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA lentiCas9-Blast Sanjana et al., 2014 Addgene #52962 pHR-SFFV-dCas9-BFP-KRAB Gilbert et al., 2013 Addgene #46911 lentiGuide-Puro Sanjana et al., 2014 Addgene #52963 Human CRISPR knockout pooled library (Brunello) Doench et al., 2016 Addgene #73178 Human CRISPRi pooled library (Dolcetto) Sanson et al., 2018 Addgene #92385 Software and Algorithms Pooled screen analysis Broad Institute https://portals.broadinstitute.org/gpp/ public/analysis-tools/crispr-gene-scoring g:Profiler Raudvere et al., 2019 https://biit.cs.ut.ee/gprofiler/gost Enrichment Map Merico et al., 2010 https://www.baderlab.org/Software/ EnrichmentMap MassHunter Agilent Technologies N/A Bio-Plex Manager software Bio-Rad N/A FlowJo FlowJo https://www.flowjo.com BD FACSDiva v8.0 Becton Dickinson N/A GraphPad Prism8 GraphPad https://www.graphpad.com/ LSM Image Browser Zeiss N/A Other Oasis HLB cartridge Waters Cat# 186000115 ExpressPlus PAGE gel Genscript Cat# M00656 iBlot 2 transfer stacks, PVDF, regular size Invitrogen Cat# IB24001 ..
CRISPR:Article Title: Illuminating Host-Mycobacterial Interactions with Genome-wide CRISPR Knockout and CRISPRi Screens.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA lentiCas9-Blast Sanjana et al., 2014 Addgene #52962 pHR-SFFV-dCas9-BFP-KRAB Gilbert et al., 2013 Addgene #46911 lentiGuide-Puro Sanjana et al., 2014 Addgene #52963 Human CRISPR knockout pooled library (Brunello) Doench et al., 2016 Addgene #73178 Human CRISPRi pooled library (Dolcetto) Sanson et al., 2018 Addgene #92385 Software and Algorithms Pooled screen analysis Broad Institute https://portals.broadinstitute.org/gpp/ public/analysis-tools/crispr-gene-scoring g:Profiler Raudvere et al., 2019 https://biit.cs.ut.ee/gprofiler/gost Enrichment Map Merico et al., 2010 https://www.baderlab.org/Software/ EnrichmentMap MassHunter Agilent Technologies N/A Bio-Plex Manager software Bio-Rad N/A FlowJo FlowJo https://www.flowjo.com BD FACSDiva v8.0 Becton Dickinson N/A GraphPad Prism8 GraphPad https://www.graphpad.com/ LSM Image Browser Zeiss N/A Other Oasis HLB cartridge Waters Cat# 186000115 ExpressPlus PAGE gel Genscript Cat# M00656 iBlot 2 transfer stacks, PVDF, regular size Invitrogen Cat# IB24001 ..
Knock-Out:Article Title: Illuminating Host-Mycobacterial Interactions with Genome-wide CRISPR Knockout and CRISPRi Screens.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA lentiCas9-Blast Sanjana et al., 2014 Addgene #52962 pHR-SFFV-dCas9-BFP-KRAB Gilbert et al., 2013 Addgene #46911 lentiGuide-Puro Sanjana et al., 2014 Addgene #52963 Human CRISPR knockout pooled library (Brunello) Doench et al., 2016 Addgene #73178 Human CRISPRi pooled library (Dolcetto) Sanson et al., 2018 Addgene #92385 Software and Algorithms Pooled screen analysis Broad Institute https://portals.broadinstitute.org/gpp/ public/analysis-tools/crispr-gene-scoring g:Profiler Raudvere et al., 2019 https://biit.cs.ut.ee/gprofiler/gost Enrichment Map Merico et al., 2010 https://www.baderlab.org/Software/ EnrichmentMap MassHunter Agilent Technologies N/A Bio-Plex Manager software Bio-Rad N/A FlowJo FlowJo https://www.flowjo.com BD FACSDiva v8.0 Becton Dickinson N/A GraphPad Prism8 GraphPad https://www.graphpad.com/ LSM Image Browser Zeiss N/A Other Oasis HLB cartridge Waters Cat# 186000115 ExpressPlus PAGE gel Genscript Cat# M00656 iBlot 2 transfer stacks, PVDF, regular size Invitrogen Cat# IB24001 ..
Software:Article Title: Illuminating Host-Mycobacterial Interactions with Genome-wide CRISPR Knockout and CRISPRi Screens.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA lentiCas9-Blast Sanjana et al., 2014 Addgene #52962 pHR-SFFV-dCas9-BFP-KRAB Gilbert et al., 2013 Addgene #46911 lentiGuide-Puro Sanjana et al., 2014 Addgene #52963 Human CRISPR knockout pooled library (Brunello) Doench et al., 2016 Addgene #73178 Human CRISPRi pooled library (Dolcetto) Sanson et al., 2018 Addgene #92385 Software and Algorithms Pooled screen analysis Broad Institute https://portals.broadinstitute.org/gpp/ public/analysis-tools/crispr-gene-scoring g:Profiler Raudvere et al., 2019 https://biit.cs.ut.ee/gprofiler/gost Enrichment Map Merico et al., 2010 https://www.baderlab.org/Software/ EnrichmentMap MassHunter Agilent Technologies N/A Bio-Plex Manager software Bio-Rad N/A FlowJo FlowJo https://www.flowjo.com BD FACSDiva v8.0 Becton Dickinson N/A GraphPad Prism8 GraphPad https://www.graphpad.com/ LSM Image Browser Zeiss N/A Other Oasis HLB cartridge Waters Cat# 186000115 ExpressPlus PAGE gel Genscript Cat# M00656 iBlot 2 transfer stacks, PVDF, regular size Invitrogen Cat# IB24001 ..
Polyacrylamide Gel Electrophoresis:Article Title: Illuminating Host-Mycobacterial Interactions with Genome-wide CRISPR Knockout and CRISPRi Screens.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA lentiCas9-Blast Sanjana et al., 2014 Addgene #52962 pHR-SFFV-dCas9-BFP-KRAB Gilbert et al., 2013 Addgene #46911 lentiGuide-Puro Sanjana et al., 2014 Addgene #52963 Human CRISPR knockout pooled library (Brunello) Doench et al., 2016 Addgene #73178 Human CRISPRi pooled library (Dolcetto) Sanson et al., 2018 Addgene #92385 Software and Algorithms Pooled screen analysis Broad Institute https://portals.broadinstitute.org/gpp/ public/analysis-tools/crispr-gene-scoring g:Profiler Raudvere et al., 2019 https://biit.cs.ut.ee/gprofiler/gost Enrichment Map Merico et al., 2010 https://www.baderlab.org/Software/ EnrichmentMap MassHunter Agilent Technologies N/A Bio-Plex Manager software Bio-Rad N/A FlowJo FlowJo https://www.flowjo.com BD FACSDiva v8.0 Becton Dickinson N/A GraphPad Prism8 GraphPad https://www.graphpad.com/ LSM Image Browser Zeiss N/A Other Oasis HLB cartridge Waters Cat# 186000115 ExpressPlus PAGE gel Genscript Cat# M00656 iBlot 2 transfer stacks, PVDF, regular size Invitrogen Cat# IB24001 ..
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